Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX257495: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-143828' containing sample 'Escherichia coli HVH 40 (4-1219782)'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.8M spots, 572.8M bases, 295.1Mb downloads

UUID: 8c66ba3b-8163-40cd-a328-e747d92d18d0

Design: jumping library

Submitted by: Broad Institute (BI)

Study: E coli UTI Bacteremia

PRJNA186072 • SRP019567 • All experiments • All runs

Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli HVH 40 (4-1219782)

SAMN01885702 • SRS402182 • All experiments • All runs

Organism: Escherichia coli HVH 40 (4-1219782)

Library:

Name: Solexa-143828

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 291694.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:3VYMR

material_type: DNA:DNA Somatic

product_order: PDO-291

product_part_number: P-MCV-0001

project: G30710

research_project: RP-192

root_sample_id: SM-2TCXP

sample_id: SM-3VYMR

work_request: 35251

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-03-16 13:01:07.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2.8M spots, 572.8M bases, 295.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR800498	2,835,864	572.8M	295.1Mb	2013-04-01

ID:: 360447

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity